Welcome to CAGECAT

the online CompArative GEne Cluster Analysis Toolbox

Introductory tutorial

Contact page

Tool explanations

Available entry points:

cblaster

clinker

Homologous gene cluster searches

Input types:

  • Protein sequences (FASTA)
  • Nucleotide sequences (FASTA)
  • Gene cluster (GenBank)
  • NCBI accessions (GenPept)
  • HMM profile identifiers

Generating publication-quality gene cluster comparison figures

Input types:

  • Gene cluster (GenBank)

Workflow of cblaster

cblaster workflow